Shokhirev, Maxim : rechercher sur Z-Library

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1

A B-ARR-mediated cytokinin transcriptional network directs hormone cross-regulation and shoot development

Xie, Mingtang, Chen, Hongyu, Huang, Ling, O’Neil, Ryan C., Shokhirev, Maxim N., Ecker, Joseph R.

Journal:

Nature Communications

Année:

2018

Langue:

english

Fichier:

PDF, 2.36 MB

english, 2018

2

Author Correction: A B-ARR-mediated cytokinin transcriptional network directs hormone cross-regulation and shoot development

Xie, Mingtang, Chen, Hongyu, Huang, Ling, O’Neil, Ryan C., Shokhirev, Maxim N., Ecker, Joseph R.

Journal:

Nature Communications

Année:

2018

Langue:

english

Fichier:

PDF, 232 KB

english, 2018

3

Cooperative Metabolic Adaptations in the Host Can Favor Asymptomatic Infection and Select for Attenuated Virulence in an Enteric Pathogen

Sanchez, Karina K., Chen, Grischa Y., Schieber, Alexandria M. Palaferri, Redford, Samuel E., Shokhirev, Maxim N., Leblanc, Mathias, Lee, Yujung M., Ayres, Janelle S.

Journal:

Année:

2018

Langue:

english

Fichier:

PDF, 4.86 MB

english, 2018

4

Paternal RLIM/Rnf12 Is a Survival Factor for Milk-Producing Alveolar Cells

Baowei Jiao, Hong Ma, Maxim N. Shokhirev, Alexander Drung, Qin Yang, JongDae Shin, Shaolei Lu, Meg Byron, Sundeep Kalantry, Arthur M. Mercurio, Jeanne B. Lawrence, Alexander Hoffmann, Ingolf Bach

Journal:

Année:

2012

Langue:

english

Fichier:

PDF, 2.49 MB

english, 2012

5

Biased coarse-grained molecular dynamics simulation approach for flexible fitting of X-ray structure into cryo electron microscopy maps

Ivan Grubisic, Maxim N. Shokhirev, Marek Orzechowski, Osamu Miyashita, Florence Tama

Journal:

Journal of Structural Biology

Année:

2010

Langue:

english

Fichier:

PDF, 3.66 MB

english, 2010

6

Effect of the N-Terminus on Heme Cavity Structure, Ligand Equilibrium, Rate Constants, and Reduction Potentials of Nitrophorin 2 from Rhodnius prolixus †

Berry, Robert E., Shokhireva, Tatiana Kh., Filippov, Igor, Shokhirev, Maxim N., Zhang, Hongjun, Walker, F. Ann

Journal:

Année:

2007

Langue:

english

Fichier:

PDF, 699 KB

english, 2007

7

Spectroscopic and Functional Characterization of Nitrophorin 7 from the Blood-Feeding Insect Rhodnius prolixus Reveals an Important Role of Its Isoform-Specific N-Terminus for Proper Protein Function †

Knipp, Markus, Yang, Fei, Berry, Robert E., Zhang, Hongjun, Shokhirev, Maxim N., Walker, F. Ann

Journal:

Année:

2007

Langue:

english

Fichier:

PDF, 823 KB

english, 2007

8

A Pathway Switch Directs BAFF Signaling to Distinct NFκB Transcription Factors in Maturing and Proliferating B Cells

Almaden, Jonathan V., Tsui, Rachel, Liu, Yi C., Birnbaum, Harry, Shokhirev, Maxim N., Ngo, Kim A., Davis-Turak, Jeremy C., Otero, Dennis, Basak, Soumen, Rickert, Robert C., Hoffmann, Alexander

Journal:

Année:

2014

Langue:

english

Fichier:

PDF, 4.05 MB

english, 2014

9

AMPK governs lineage specification through Tfeb-dependent regulation of lysosomes

Young, Nathan P., Kamireddy, Anwesh, Van Nostrand, Jeanine L., Eichner, Lillian J., Shokhirev, Maxim Nikolaievich, Dayn, Yelena, Shaw, Reuben J.

Journal:

Genes & Development

Année:

2016

Langue:

english

Fichier:

PDF, 818 KB

english, 2016

10

Effect of Mutation of Carboxyl Side-Chain Amino Acids Near the Heme on the Midpoint Potentials and Ligand Binding Constants of Nitrophorin 2 and Its NO, Histamine, and Imidazole Complexes

Berry, Robert E., Shokhirev, Maxim N., Ho, Arthur Y. W., Yang, Fei, Shokhireva, Tatiana K., Zhang, Hongjun, Weichsel, Andrzej, Montfort, William R., Walker, F. Ann

Journal:

Journal of the American Chemical Society

Année:

2009

Langue:

english

Fichier:

PDF, 1.02 MB

english, 2009

11

Integration of CpG-free DNA induces de novo methylation of CpG islands in pluripotent stem cells

Takahashi, Yuta, Wu, Jun, Suzuki, Keiichiro, Martinez-Redondo, Paloma, Li, Mo, Liao, Hsin-Kai, Wu, Min-Zu, Hernández-Benítez, Reyna, Hishida, Tomoaki, Shokhirev, Maxim Nikolaievich, Esteban, Concepcio

Journal:

Année:

2017

Langue:

english

Fichier:

PDF, 1.07 MB

english, 2017

12

Differentiation of Inflammation-Responsive Astrocytes from Glial Progenitors Generated from Human Induced Pluripotent Stem Cells

Santos, Renata, Vadodaria, Krishna C., Jaeger, Baptiste N., Mei, Arianna, Lefcochilos-Fogelquist, Sabrina, Mendes, Ana P.D., Erikson, Galina, Shokhirev, Maxim, Randolph-Moore, Lynne, Fredlender, Calli

Journal:

Stem Cell Reports

Année:

2017

Langue:

english

Fichier:

PDF, 3.55 MB

english, 2017

13

The Aging Astrocyte Transcriptome from Multiple Regions of the Mouse Brain

Boisvert, Matthew M., Erikson, Galina A., Shokhirev, Maxim N., Allen, Nicola J.

Journal:

Année:

2018

Langue:

english

Fichier:

PDF, 8.13 MB

english, 2018

14

Glioblastoma Model Using Human Cerebral Organoids

Ogawa, Junko, Pao, Gerald M., Shokhirev, Maxim N., Verma, Inder M.

Journal:

Année:

2018

Langue:

english

Fichier:

PDF, 5.81 MB

english, 2018

15

Efficient Generation of CA3 Neurons from Human Pluripotent Stem Cells Enables Modeling of Hippocampal Connectivity In Vitro

Sarkar, Anindita, Mei, Arianna, Paquola, Apua C.M., Stern, Shani, Bardy, Cedric, Klug, Jason R., Kim, Stacy, Neshat, Neda, Kim, Hyung Joon, Ku, Manching, Shokhirev, Maxim N., Adamowicz, David H., Marc

Journal:

Année:

2018

Langue:

english

Fichier:

PDF, 6.28 MB

english, 2018

16

The influence of transcript assembly on the proteogenomics discovery of microproteins

Ma, Jiao, Saghatelian, Alan, Shokhirev, Maxim Nikolaievich, Xue, Yu

Journal:

Année:

2018

Langue:

english

Fichier:

PDF, 1.75 MB

english, 2018

17

FlowMax: A Computational Tool for Maximum Likelihood Deconvolution of CFSE Time Courses

Shokhirev, Maxim Nikolaievich, Hoffmann, Alexander, Lythe, Grant

Journal:

Année:

2013

Langue:

english

Fichier:

PDF, 2.87 MB

english, 2013

18

Reprogramming pancreatic stellate cells via p53 activation: A putative target for pancreatic cancer therapy

Saison-Ridinger, Maya, DelGiorno, Kathleen E., Zhang, Tejia, Kraus, Annabelle, French, Randall, Jaquish, Dawn, Tsui, Crystal, Erikson, Galina, Spike, Benjamin T., Shokhirev, Maxim N., Liddle, Christop

Journal:

Année:

2017

Langue:

english

Fichier:

PDF, 4.05 MB

english, 2017

19

Chromatin accessibility underlies synthetic lethality of SWI/SNF subunits in ARID1A-mutant cancers

Kelso, Timothy W R, Porter, Devin K, Amaral, Maria Luisa, Shokhirev, Maxim N, Benner, Christopher, Hargreaves, Diana C

Journal:

Année:

2017

Langue:

english

Fichier:

PDF, 5.47 MB

english, 2017

20

Multicilin and activated E2f4 induce multiciliated cell differentiation in primary fibroblasts

Kim, Seongjae, Ma, Lina, Shokhirev, Maxim N., Quigley, Ian, Kintner, Chris

Journal:

Scientific Reports

Année:

2018

Fichier:

PDF, 9.09 MB

2018

21

BART: bioinformatics array research tool

Amaral, Maria Luisa, Erikson, Galina A., Shokhirev, Maxim N.

Journal:

BMC Bioinformatics

Année:

2018

Langue:

english

Fichier:

PDF, 682 KB

english, 2018

22

Multicilin and activated E2f4 induce multiciliated cell differentiation in primary fibroblasts

Kim, Seongjae, Ma, Lina, Shokhirev, Maxim N., Quigley, Ian, Kintner, Chris

Journal:

Scientific Reports

Année:

2018

Langue:

english

Fichier:

PDF, 9.09 MB

english, 2018

23

Genetic Analysis Reveals AMPK Is Required to Support Tumor Growth in Murine Kras-Dependent Lung Cancer Models

Eichner, Lillian J., Brun, Sonja N., Herzig, Sébastien, Young, Nathan P., Curtis, Stephanie D., Shackelford, David B., Shokhirev, Maxim N., Leblanc, Mathias, Vera, Liliana I., Hutchins, Amanda, Ross,

Journal:

Cell Metabolism

Année:

2018

Langue:

english

Fichier:

PDF, 6.80 MB

english, 2018

24

A non-canonical BRD9-containing BAF chromatin remodeling complex regulates naive pluripotency in mouse embryonic stem cells

Gatchalian, Jovylyn, Malik, Shivani, Ho, Josephine, Lee, Dong-Sung, Kelso, Timothy W. R., Shokhirev, Maxim N., Dixon, Jesse R., Hargreaves, Diana C.

Journal:

Nature Communications

Année:

2018

Langue:

english

Fichier:

PDF, 3.22 MB

english, 2018

25

Predicting age from the transcriptome of human dermal fibroblasts

Fleischer, Jason G., Schulte, Roberta, Tsai, Hsiao H., Tyagi, Swati, Ibarra, Arkaitz, Shokhirev, Maxim N., Huang, Ling, Hetzer, Martin W., Navlakha, Saket

Journal:

Année:

2018

Langue:

english

Fichier:

PDF, 1.11 MB

english, 2018

26

Genetic Liver-Specific AMPK Activation Protects against Diet-Induced Obesity and NAFLD

Garcia, Daniel, Hellberg, Kristina, Chaix, Amandine, Wallace, Martina, Herzig, Sébastien, Badur, Mehmet G., Lin, Terry, Shokhirev, Maxim N., Pinto, Antonio F.M., Ross, Debbie S., Saghatelian, Alan, Pa

Journal:

Année:

2019

Langue:

english

Fichier:

PDF, 5.28 MB

english, 2019

27

Heterozygous Mutations in SMARCA2 Reprogram the Enhancer Landscape by Global Retargeting of SMARCA4

Gao, Fangjian, Elliott, Nicholas J., Ho, Josephine, Sharp, Alexzander, Shokhirev, Maxim N., Hargreaves, Diana C.

Journal:

Année:

2019

Langue:

english

Fichier:

PDF, 5.89 MB

english, 2019

28

Revamping the Evolutionary Theories of Aging

Johnson, Adiv A., Shokhirev, Maxim N., Shoshitaishvili, Boris

Journal:

Ageing Research Reviews

Année:

2019

Langue:

english

Fichier:

PDF, 4.44 MB

english, 2019

29

Dynamical Electrical Complexity Is Reduced during Neuronal Differentiation in Autism Spectrum Disorder

Amatya, Debha N., Linker, Sara B., Mendes, Ana P.D., Santos, Renata, Erikson, Galina, Shokhirev, Maxim N., Zhou, Yuansheng, Sharpee, Tatyana, Gage, Fred H., Marchetto, Maria C., Kim, Yeni

Journal:

Stem Cell Reports

Année:

2019

Langue:

english

Fichier:

PDF, 1.28 MB

english, 2019

30

Accurate annotation of human protein-coding small open reading frames

Martinez, Thomas F., Chu, Qian, Donaldson, Cynthia, Tan, Dan, Shokhirev, Maxim N., Saghatelian, Alan

Journal:

Nature Chemical Biology

Année:

2019

Fichier:

PDF, 4.36 MB

2019

31

Transcriptional and Functional Changes of the Human Microvasculature during Physiological Aging and Alzheimer Disease

Bersini, Simone, Arrojo e Drigo, Rafael, Huang, Ling, Shokhirev, Maxim N., Hetzer, Martin W.

Journal:

Advanced Biosystems

Année:

2020

Langue:

english

Fichier:

PDF, 2.42 MB

english, 2020

32

Systematic review and analysis of human proteomics aging studies unveils a novel proteomic aging clock and identifies key processes that change with age

Johnson, Adiv A., Shokhirev, Maxim N., Wyss-Coray, Tony, Lehallier, Benoit

Journal:

Ageing Research Reviews

Année:

2020

Fichier:

PDF, 4.68 MB

2020

33

Dynamic regulation of histone modifications and long-range chromosomal interactions during postmitotic transcriptional reactivation

Kang, Hyeseon, Shokhirev, Maxim N., Xu, Zhichao, Chandran, Sahaana, Dixon, Jesse R., Hetzer, Martin W.

Journal:

Genes & Development

Année:

2020

Fichier:

PDF, 4.16 MB

2020

34

Diverse proteins aggregate in mild cognitive impairment and Alzheimerâs disease brain

Kepchia, Devin, Huang, Ling, Dargusch, Richard, Rissman, Robert A., Shokhirev, Maxim N., Fischer, Wolfgang, Schubert, David

Journal:

Alzheimer's Research & Therapy

Année:

2020

Fichier:

PDF, 3.32 MB

2020

35

Targeting of intracellular Ca2+ stores as a therapeutic strategy against age-related neurotoxicities

Goldberg, Joshua, Currais, Antonio, Ates, Gamze, Huang, Ling, Shokhirev, Maxim, Maher, Pamela, Schubert, David

Journal:

npj Aging and Mechanisms of Disease

Année:

2020

Fichier:

PDF, 2.27 MB

2020

36

AMPK regulation of Raptor and TSC2 mediate metformin effects on transcriptional control of anabolism and inflammation

Van Nostrand, Jeanine L., Hellberg, Kristina, Luo, En-Ching, Van Nostrand, Eric L., Dayn, Alina, Yu, Jingting, Shokhirev, Maxim N., Dayn, Yelena, Yeo, Gene W., Shaw, Reuben J.

Journal:

Genes & Development

Année:

2020

Fichier:

PDF, 27.64 MB

2020

37

Intracellular amyloid toxicity induces oxytosis/ferroptosis regulated cell death

Huang, Ling, McClatchy, Daniel B., Maher, Pamela, Liang, Zhibin, Diedrich, Jolene K., Soriano-Castell, David, Goldberg, Joshua, Shokhirev, Maxim, Yates, John R., Schubert, David, Currais, Antonio

Journal:

Cell Death and Disease

Année:

2020

Fichier:

PDF, 2.18 MB

2020

38

Modeling the human aging transcriptome across tissues, health status, and sex

Shokhirev, Maxim N., Johnson, Adiv A.

Journal:

Année:

2020

Fichier:

PDF, 1.90 MB

2020